PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g872540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 373aa    MW: 41062.9 Da    PI: 6.8553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g872540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20179228255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Pd.00g872540.m01 179 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 228
                       59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MATAIDLYSS SSMTPDLSDS LREDQLMKAL MPFMKSVSAT SSLTSISSSI SSPTSPSTSS  60
SFSSYPSSYT YHPPLYSSQP SLYPGFCSPS TTHMFDQVGF EQTGSIGLNQ LTPSQILQIQ  120
TQMVQQQQEH QQKEQIAALA SPASLQNQYQ HQNPRTLKFL SPKAIPMKQV GAPSKPTKLY  180
RGVRQRHWGK WVAEIRLPKN RTRLWLGTFD TAEEAALAYD KAAYKLRGDF ARLNFPHLKH  240
QGAHVSGDFG HYKPLHSSVD AKLQAICQSL AANSAKQGKT GELCSVAERK PAISSPSEVS  300
LKTELKGEWE LTGVECYRPE ISSSPSQSVE SSAGSSSPES DITFLEFSDS QWDEAENFGL  360
EKYPSVEIDW SAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.12e-58ERF family protein