PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g871790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 228aa    MW: 25255.8 Da    PI: 7.2139
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g871790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.36e-5525120297
             NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                       ++qdrflPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkc rekrktingddllwa++tlGfe+yv plk yl+kyre+e
  Pd.00g871790.m01  25 KDQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCLREKRKTINGDDLLWAMTTLGFENYVGPLKGYLNKYRETE 117
                       79******************************************************************************************* PP

             NF-YB  95 gek 97 
                       gek
  Pd.00g871790.m01 118 GEK 120
                       *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MSGRRNQTSP VGSPLSGNVS DGSSKDQDRF LPIANVSRIM KKSLPANAKI SKEAKETVQE  60
CVSEFISFIT GEASDKCLRE KRKTINGDDL LWAMTTLGFE NYVGPLKGYL NKYRETEGEK  120
NSMTRQEEDP SQQQQHHNTL NTNLQHGSNN DQMNTALNAN NISMSTSKVD LFNGGFYFLG  180
GQQQQQQVTQ NYNLASAGAY NLSRIHESGD GNGNRDLATH HLHNGIGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-62NF-YB family protein