PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g871250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 231aa    MW: 26422.6 Da    PI: 9.1879
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g871250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.41.3e-32152210159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  Pd.00g871250.m01 152 LDDGYKWRKYGQKVVKNTQHPRSYYRCTMDNCRVKKRVERLAEDPRMVITTYEGRHVHS 210
                       59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MLSQQQGLFE NEEGSNAQMG FFSIPPNLNF SSLGSLKAFG SSSIPSSTNL SETLLPSLTP  60
LKHREDHNIT TSSDFGGSQL LSLQRSTANL WAWGEVSDDH ECLSSKRSNG GDDRHHHHMG  120
VSAMKMKKMK AIRRKVREPR FCFKTMSEVD VLDDGYKWRK YGQKVVKNTQ HPRSYYRCTM  180
DNCRVKKRVE RLAEDPRMVI TTYEGRHVHS PSHDLDQDSQ QASSHLNNFF W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.16e-61WRKY family protein