PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g870690.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 496aa MW: 53993.7 Da PI: 9.4807 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.8 | 1e-40 | 185 | 261 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ dls+ak+yhr+h++C hsk+p+v+v+g+e+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+ Pd.00g870690.m01 185 CQVEGCNIDLSSAKDYHRKHRICANHSKSPKVVVEGVERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQT 261 **************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence |
MNSVLLMEWN EKPPSLWDLE NLFMLGAKVT DNSKKLQPAD WGIEGERGMN SESFYSTGVD 60 GGSGVSGSDL GDGSSKSSKS ASASSSVGES KKPNFNLDAF EGFPNDFIHK NESAKAEALG 120 SSPTHEVSAG SGEPLLSLKL GKRMYFEDVC AGNNPKSSSL SVISSSMPKT KRSKSTGQSA 180 FAPHCQVEGC NIDLSSAKDY HRKHRICANH SKSPKVVVEG VERRFCQQCS RFHGLSEFDE 240 KKRSCRRRLS DHNARRRKPQ TEALRNPTRL SSSLFSTDER QQMSLVLDKA PSVYTRHPSN 300 LTWDGACSFK FGQTKEYFPK PAKGGGTGGQ LNLANNGIPS SITMLYHDSS RLSPSKGTAA 360 EVLNRGAEEP MISFNLGATQ DFHRALSLLS TSSWVSGEAK PVALDNNTNQ NYQNNIPQPG 420 LQAMTQGLPV SSEIFISSKG LMSLVIKPTN SIKFDPKDSS VFHINVTLIK ELSTALVLQP 480 TRFQILRCVV ANSRAV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 241 | 258 | KKRSCRRRLSDHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 9e-75 | SBP family protein |