PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g870590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 880aa MW: 98401.9 Da PI: 5.8433

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g870590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	93.8	1.5e-29	13	107	3	91
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpks.....gsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +e ++rwlk+ e++ iL+n+ek++l+ e++++p+s gsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LK +g e +Y +e Pd.00g870590.m01 13 QEaQTRWLKPAEVLYILQNHEKFKLAPEPPQQPSSkspfgGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKKNGRENPDKLYGTGE 105 5669*********************999988765555599*************************************998888888776 PP CG-1 90 en 91 ++ Pd.00g870590.m01 106 SD 107 55 PP

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence
MMQSGYNIND LFQEAQTRWL KPAEVLYILQ NHEKFKLAPE PPQQPSSKSP FGGSLFLFNK 60 RVLRFFRRDG HHWRKKKDGR TVGEAHERLK KNGRENPDKL YGTGESDSSA KFDVSQALRQ 120 LEEQLSLNED SFNEFVDDNP NSDIMDRFNE FLDDTNGSDI LEDHSDMTNQ DQFTAFHGPE 180 YVVHDQFYGG RAQMQGNANN SDEHSQFIGQ EFADRNKESV PWKEVLDSCK PSSVVEPKEK 240 CLYELDTNEK LPSSFRSGPT DGQEHFSLSL PEEVDSFKLS PCSSAMGTHS DYYTSLFEQG 300 QTGTLDSDIS LTVAQKQKFT IREISPEWGY ATEATKVIIV GSFLCDPSES AWSCMFGDVE 360 VPAQIIQDGV LRCKAPPHLF GKVTICITSS NRVSCSEVRE FEYRVKSSSG TNNSPPTETT 420 KSAEELLLLV RFVQMLMSDS SMQNRDSVEP ETLRRLKADD DSWDSIIEAL LLGNGSASSN 480 IYWLLEELLK DKLQQWLSSR SHGLDQTGCS LSKKEQGIIH MVAGLGFEWA LNSILSGGVN 540 INFRDINGWT ALHWAARFGR EKMVAVLIAS GASAGAVTDP NSQDPIGKTP ASIAAISGNK 600 GLAGYLSEVS LTSHLSSLTL EESELSKGSA EVEAEITVNS ISNRSLQGNE DQASLKNTLA 660 AVRNSAQAAA RIQSAFRAHS FRKRQQKEAG VSIDDYGISS DDIQGLSAMS KLAFRNPRDY 720 NSAAVSIQKK YRGWKGRKDF LALRQKVVKI QAHVRGYQLR KHYKVICWAV GILDKVVLRW 780 RRKGVGLRGF RHETQSSEES EDEDILKVFR KQKVDGAIEE AVSRVLSMVE SPKARQQYHR 840 MLGRYHQAKA ELGGTSGEAD VPNSLDDTFN VEDIDMYQFP

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence

MMQSGYNIND LFQEAQTRWL KPAEVLYILQ NHEKFKLAPE PPQQPSSKSP FGGSLFLFNK  60
RVLRFFRRDG HHWRKKKDGR TVGEAHERLK KNGRENPDKL YGTGESDSSA KFDVSQALRQ  120
LEEQLSLNED SFNEFVDDNP NSDIMDRFNE FLDDTNGSDI LEDHSDMTNQ DQFTAFHGPE  180
YVVHDQFYGG RAQMQGNANN SDEHSQFIGQ EFADRNKESV PWKEVLDSCK PSSVVEPKEK  240
CLYELDTNEK LPSSFRSGPT DGQEHFSLSL PEEVDSFKLS PCSSAMGTHS DYYTSLFEQG  300
QTGTLDSDIS LTVAQKQKFT IREISPEWGY ATEATKVIIV GSFLCDPSES AWSCMFGDVE  360
VPAQIIQDGV LRCKAPPHLF GKVTICITSS NRVSCSEVRE FEYRVKSSSG TNNSPPTETT  420
KSAEELLLLV RFVQMLMSDS SMQNRDSVEP ETLRRLKADD DSWDSIIEAL LLGNGSASSN  480
IYWLLEELLK DKLQQWLSSR SHGLDQTGCS LSKKEQGIIH MVAGLGFEWA LNSILSGGVN  540
INFRDINGWT ALHWAARFGR EKMVAVLIAS GASAGAVTDP NSQDPIGKTP ASIAAISGNK  600
GLAGYLSEVS LTSHLSSLTL EESELSKGSA EVEAEITVNS ISNRSLQGNE DQASLKNTLA  660
AVRNSAQAAA RIQSAFRAHS FRKRQQKEAG VSIDDYGISS DDIQGLSAMS KLAFRNPRDY  720
NSAAVSIQKK YRGWKGRKDF LALRQKVVKI QAHVRGYQLR KHYKVICWAV GILDKVVLRW  780
RRKGVGLRGF RHETQSSEES EDEDILKVFR KQKVDGAIEE AVSRVLSMVE SPKARQQYHR  840
MLGRYHQAKA ELGGTSGEAD VPNSLDDTFN VEDIDMYQFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein