PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g869920.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 340aa MW: 38204.6 Da PI: 5.5838 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 87.7 | 1.4e-27 | 41 | 134 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 rWt+qe+l+Li+++r+ e+r + + +++p+W++vs +++++g++r+p+qC+++w+nl++++kki+e+e +r++e++s +++ ++l Pd.00g869920.m01 41 RWTRQEILVLINGKRYAENRGGGRTprsdfgsgQAEPKWAAVSTYCKKHGVNRGPVQCRKRWSNLAGDFKKIREWEVQRKDETESFWVMRNDL 133 8*******************9954334455666**************************************************999*999998 PP trihelix 86 e 86 + Pd.00g869920.m01 134 R 134 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MALEQQVSLN PVDGETNGVD ARHPTSAETG DDASKAPRLP RWTRQEILVL INGKRYAENR 60 GGGRTPRSDF GSGQAEPKWA AVSTYCKKHG VNRGPVQCRK RWSNLAGDFK KIREWEVQRK 120 DETESFWVMR NDLRRERKLP GFFDKEVYDI MEAVPGAPIS LALPGPTRVE SEDVKEEGMT 180 EEAENLFDSI QRPTEDGLFS DDESGRSPEK EVRFKEGPGS TTVISGPLPI SEKQYKPIPQ 240 GCQGQGAADQ KQPASIPEIG STSQDRKRKR FTVDVDEETS NLQNQLIDVM ERNGKVLSDY 300 LHAQNSHSQL DREQRKEHSD SLIAVLNKLA DAFMRIAEKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 2e-99 | Trihelix family protein |