PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g869790.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 27162.7 Da PI: 6.4005 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.3 | 5.3e-20 | 56 | 105 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa a+++a+++++g Pd.00g869790.m01 56 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEDAAIAYDNAALRFKG 105 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MSAMVSALTQ VIGTTEDHHQ GTVVQSNPSS ISHSIVKEEP DRPEPVQEQE TVRRRHYRGV 60 RQRPWGKWAA EIRDPKKAAR VWLGTFETAE DAAIAYDNAA LRFKGTKAKL NFPERVQGKT 120 DFGMLMATSG STRTTSSSSA STQQNQNFTG PAGRGVVAPP PAAPSMAPQP ETFPDLYQYA 180 QLLSGNDIDF SYHSSNLFNH QDPFGSQISS PTTHFSSSNA SQPPQRQQQD DQDEDGKDWN 240 WSNPSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07310.1 | 3e-28 | ERF family protein |