PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g867790.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 506aa MW: 55125.7 Da PI: 7.9828

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g867790.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.9	5e-34	230	286	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++++ei+Y+geHnhe Pd.00g867790.m01 230 DDGYNWRKYGQKQVKGSEFPRSYYKCTHSNCPVKKKVERSI-DGQITEIIYKGEHNHE 286 8**************************************.*************8 PP
2	WRKY	107.5	6.4e-34	395	453	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++ C+v+k+ver+++dpk+v++tYeg+Hnh+ Pd.00g867790.m01 395 LDDGYRWRKYGQKVVKGNPYPRSYYKCTFPACNVRKHVERASTDPKAVITTYEGKHNHD 453 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MAENQEQPPG PPPSTSSSPL KSAAAPPPPR PTITLPPRTS FETLFNSGGA NSGPGFGLGF 60 SPGPMTLVSG FLSDGEDCKS FSQLLAGAMS PAARPPGFPQ LEDRGSGDGD DNSDFRFKHN 120 RPSPMFSVPS PGLLDSPGLF SPGQGPFGMT HQQALAQVTA QAAQSSSYFH IPTEYSSLTQ 180 LPAFTSDSTA PQEMPSGAAD SRVAIKESSD ISHSDQRSQP SSFTVDKPND DGYNWRKYGQ 240 KQVKGSEFPR SYYKCTHSNC PVKKKVERSI DGQITEIIYK GEHNHERPQS KRAKDSGNPI 300 GNIQANPDLA SQVHGGHLNK SKKGQESSQA THDHLSGTSD SEEVGDAETR VDEKDEDQPD 360 PKRRNTEVRA KPASSHRTVT EPRIIVQTTS EVDLLDDGYR WRKYGQKVVK GNPYPRSYYK 420 CTFPACNVRK HVERASTDPK AVITTYEGKH NHDVPASKTG SHYAANNNAS NLRAVNAGTE 480 KINKMDLRNN DQQPIARLRL KEEQIT

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MAENQEQPPG PPPSTSSSPL KSAAAPPPPR PTITLPPRTS FETLFNSGGA NSGPGFGLGF  60
SPGPMTLVSG FLSDGEDCKS FSQLLAGAMS PAARPPGFPQ LEDRGSGDGD DNSDFRFKHN  120
RPSPMFSVPS PGLLDSPGLF SPGQGPFGMT HQQALAQVTA QAAQSSSYFH IPTEYSSLTQ  180
LPAFTSDSTA PQEMPSGAAD SRVAIKESSD ISHSDQRSQP SSFTVDKPND DGYNWRKYGQ  240
KQVKGSEFPR SYYKCTHSNC PVKKKVERSI DGQITEIIYK GEHNHERPQS KRAKDSGNPI  300
GNIQANPDLA SQVHGGHLNK SKKGQESSQA THDHLSGTSD SEEVGDAETR VDEKDEDQPD  360
PKRRNTEVRA KPASSHRTVT EPRIIVQTTS EVDLLDDGYR WRKYGQKVVK GNPYPRSYYK  420
CTFPACNVRK HVERASTDPK AVITTYEGKH NHDVPASKTG SHYAANNNAS NLRAVNAGTE  480
KINKMDLRNN DQQPIARLRL KEEQIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-150	WRKY family protein