PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g867500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 290aa MW: 31914.3 Da PI: 7.6375

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g867500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.1	7.9e-33	169	226	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp+vv++tYeg+H h+ Pd.00g867500.m01 169 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHH 226 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MDDVKDNRDP ASTTEFTTQS TWPLDPDSAY FFASHDVRDN TLLTEFGWNF HPDGSRPDGF 60 SELDPIGTRG MSDMAATSSQ LVADCLRPAD SSSSSTAAFR SSDQVPVVGS ASTNPSVSST 120 SSEDPPEKST GSGGKPPPEI PSKVKKKGQK RIRQPRFAFM TKSEVDHLED GYRWRKYGQK 180 AVKNSPFPRS YYRCTNSKCT VKKRVERSSE DPTVVITTYE GQHCHHTVAF PRGGVIAQES 240 GFAGHHLAQL PPVSSHFLYY PAIQPRERTT SVPTDEGLLG DIVPPGMRNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	1e-70	WRKY family protein