PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g863770.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 159aa MW: 17897 Da PI: 11.4255 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.4 | 6.1e-09 | 71 | 111 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L Pd.00g863770.m01 71 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 111 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MGNQIQEPLT PRLIKTSPPP TSYEKRNSMA AMREMIFRIA AMQPIQIDPE SVKPPKRRNV 60 KISKDPQSVA ARHRRERISE KIRILQRLVP GGTKMDTASM LDEAIHYVKF LKKQVQTLER 120 AGADRPIGVG FQGAGQLGNV NYSALLRPSH LVGSMQMLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 2e-49 | bHLH family protein |