PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g863630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 504aa MW: 55887 Da PI: 5.5632

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g863630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.7	2.9e-36	10	101	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++ +++isw+e+g++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF++++F++g+kell Pd.00g863630.m01 10 FLTKTYQLVDDPSWDDVISWNESGTTFVVWKTVDFARDMLPKYFKHNNFSSFVRQLNTYGFRKTVPDQ---------WEFANDNFRRGQKELL 93 9*************************************************************9998.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+ks Pd.00g863630.m01 94 SEIRRRKS 101 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MAQRSVPAPF LTKTYQLVDD PSWDDVISWN ESGTTFVVWK TVDFARDMLP KYFKHNNFSS 60 FVRQLNTYGF RKTVPDQWEF ANDNFRRGQK ELLSEIRRRK SVTAGPGKAT ASEKSGGPST 120 PSNSGEEMAS TSTSSPDSKN PGSVETAAMG QASDLSGENE KLKKENENLS SELAKTKKQC 180 DELVGFLMDY LKTPPPPSSS FPRPASSSPS SALLSRPSCI RVESSPMDLN NQASKIKFTD 240 FPYVSAPHRN LMVDLVSTLE TRLGPQLLPC TLPPDVQYYQ NETGTNHASL HIRSGLASSP 300 VDFILGSWLH CELPTGGALN ITSLSSYLNQ TTDAPNFLLE LIQSSPTSLV LILDLPPRKD 360 LVLHPDYLQT FYQDTQLDTP RQRLDKLAEA KPYFSSSLYI RSVVSPTAIL VRIEAEAGGQ 420 GQTLEEIIEN HVGPIAKEVL GIWLDQCACG TREVEEDERA YLKKRDDLIK RKTIEIDLGS 480 NFPRLFGPDA ADRVLGAIKE VYRV

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MAQRSVPAPF LTKTYQLVDD PSWDDVISWN ESGTTFVVWK TVDFARDMLP KYFKHNNFSS  60
FVRQLNTYGF RKTVPDQWEF ANDNFRRGQK ELLSEIRRRK SVTAGPGKAT ASEKSGGPST  120
PSNSGEEMAS TSTSSPDSKN PGSVETAAMG QASDLSGENE KLKKENENLS SELAKTKKQC  180
DELVGFLMDY LKTPPPPSSS FPRPASSSPS SALLSRPSCI RVESSPMDLN NQASKIKFTD  240
FPYVSAPHRN LMVDLVSTLE TRLGPQLLPC TLPPDVQYYQ NETGTNHASL HIRSGLASSP  300
VDFILGSWLH CELPTGGALN ITSLSSYLNQ TTDAPNFLLE LIQSSPTSLV LILDLPPRKD  360
LVLHPDYLQT FYQDTQLDTP RQRLDKLAEA KPYFSSSLYI RSVVSPTAIL VRIEAEAGGQ  420
GQTLEEIIEN HVGPIAKEVL GIWLDQCACG TREVEEDERA YLKKRDDLIK RKTIEIDLGS  480
NFPRLFGPDA ADRVLGAIKE VYRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36990.1	9e-64	HSF family protein