PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g863600.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 1041aa MW: 115732 Da PI: 8.7662

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g863600.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63.3	5.2e-20	914	963	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp +r +r++lg+f taeeAa+a+++a+ +++g Pd.00g863600.m01 914 KYRGVRRRP-WGKWAAEIRDP----QRaARVWLGTFETAEEAARAYDKAAIEFRG 963 8******.******9....258*********************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1041 aa Download sequence
MGFHFRVLNT LSSSSPSILS FVRHKHYSIT AKTTHFLRLL NLCKTSKDLK PLKSFLIVHG 60 LVNDVFPIEQ FVRSCFHLGA SHLALSLFQQ IQRPSLGLQN LIIRCLCNDG LYQDLLYVYL 120 NSRALGCPSD DFTFPFVIKA CAALGAFKIG KQVHGVVFRA GFEQNLFIQT ALTYFYARTG 180 CMEMARALID RIPQPDLVPW NALIAGYSSN GFNWEAFDVF REIIFMDLKP NLSTLASIIP 240 VCTRLGCIHT GKSLHCFAVK SGYLFNDFLV PALISMYAGD EDLCGARNLF DSVLEKKVVV 300 WNAMISAYTQ RQKAMSAFKM FRCMLRVGTQ PNLITFVSII PSCENSISLT FGESLHAGVI 360 KHGSENQLPI LTALVSMYAK LGNINSSRYL FEQTPSKKLL MWNSMISGYV YNGLWDLSLD 420 VFRKMQFSGF DSDAVSIVSI LSACSKLEAD LLGRSAHAFS IRKGSHSNLN LSNALLAFYS 480 GCHHFSYAVT LFHKMPIRNA ITWNTLISSC VHRGEMEKAV PIYHQMQKEG FKLDLVTLIS 540 VLPSFSEKEN LGQGMAIHGY TIKDGFSSDI SMVNSLISMY CNCGDLDAGR LLFEVLPKRS 600 LVSWNALMTG FRYHNLQKKV LVLLGEMMKS GERPNSVTLL NLLAACYTQL QGKSIHSVAV 660 ISGIVEETPL LTSLMFMYAR FDNTNSCLLL FQMGNMGDIS LWNAIISVHI RTKNSKIAVA 720 SFSDLLQMGF KPDNVTVLSL ISACVQLSSL SLAHSVMAYI IRKGFDNDLL ISNALIDLHA 780 KCGNILVARK LFDGLVEKDE VSWNRITPKK EQLDKNALAR QSHTARAGAL HHSLRPQAFH 840 SATSSVPSTR DGSQSATDQV HMLSFSAEGD TCRVCGIEGC LGCDYFPPTT LPEGNKQLNL 900 GSGANAGTRK GKNKYRGVRR RPWGKWAAEI RDPQRAARVW LGTFETAEEA ARAYDKAAIE 960 FRGDKAKLNF SLTSSDGHSN ITNGNITSSS RTRTSSQLIR SMEEADQDKV NPITVKQSEK 1020 IEIYESSAPQ EENDQFLWDM L

Sequence ? help Back to Top

Protein Sequence Length: 1041 aa Download sequence

MGFHFRVLNT LSSSSPSILS FVRHKHYSIT AKTTHFLRLL NLCKTSKDLK PLKSFLIVHG  60
LVNDVFPIEQ FVRSCFHLGA SHLALSLFQQ IQRPSLGLQN LIIRCLCNDG LYQDLLYVYL  120
NSRALGCPSD DFTFPFVIKA CAALGAFKIG KQVHGVVFRA GFEQNLFIQT ALTYFYARTG  180
CMEMARALID RIPQPDLVPW NALIAGYSSN GFNWEAFDVF REIIFMDLKP NLSTLASIIP  240
VCTRLGCIHT GKSLHCFAVK SGYLFNDFLV PALISMYAGD EDLCGARNLF DSVLEKKVVV  300
WNAMISAYTQ RQKAMSAFKM FRCMLRVGTQ PNLITFVSII PSCENSISLT FGESLHAGVI  360
KHGSENQLPI LTALVSMYAK LGNINSSRYL FEQTPSKKLL MWNSMISGYV YNGLWDLSLD  420
VFRKMQFSGF DSDAVSIVSI LSACSKLEAD LLGRSAHAFS IRKGSHSNLN LSNALLAFYS  480
GCHHFSYAVT LFHKMPIRNA ITWNTLISSC VHRGEMEKAV PIYHQMQKEG FKLDLVTLIS  540
VLPSFSEKEN LGQGMAIHGY TIKDGFSSDI SMVNSLISMY CNCGDLDAGR LLFEVLPKRS  600
LVSWNALMTG FRYHNLQKKV LVLLGEMMKS GERPNSVTLL NLLAACYTQL QGKSIHSVAV  660
ISGIVEETPL LTSLMFMYAR FDNTNSCLLL FQMGNMGDIS LWNAIISVHI RTKNSKIAVA  720
SFSDLLQMGF KPDNVTVLSL ISACVQLSSL SLAHSVMAYI IRKGFDNDLL ISNALIDLHA  780
KCGNILVARK LFDGLVEKDE VSWNRITPKK EQLDKNALAR QSHTARAGAL HHSLRPQAFH  840
SATSSVPSTR DGSQSATDQV HMLSFSAEGD TCRVCGIEGC LGCDYFPPTT LPEGNKQLNL  900
GSGANAGTRK GKNKYRGVRR RPWGKWAAEI RDPQRAARVW LGTFETAEEA ARAYDKAAIE  960
FRGDKAKLNF SLTSSDGHSN ITNGNITSSS RTRTSSQLIR SMEEADQDKV NPITVKQSEK  1020
IEIYESSAPQ EENDQFLWDM L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34410.1	2e-26	ERF family protein