PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g862870.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 245aa    MW: 25135.9 Da    PI: 8.2897
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g862870.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.81.1e-382888262
            zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                      ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s
  Pd.00g862870.m01 28 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRS 88
                      57889****************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MPSDSSDQQN NQNRRPAKAQ TPGAPPPEQE HLPCPRCDST NTKFCYYNNY NFSQPRHFCK  60
SCRRYWTHGG TLRDIPVGGG TRKNAKRSRT TSSSAMIATT ATSSLSDHPI PPTPVFMNPG  120
GAAAFGDMKG NVGNGCGGGG GGASFTSLLN TQGPGFLALG GFGLGLANGF EEMGFGLGRA  180
VWPFPGVGDG GAGVGGNGGG HGMMNTWQFE SGEGGGIVNV GVGSVGGEFC SWPELAISTP  240
GNGLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.12e-43Dof family protein