PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g862790.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 312aa MW: 35587.4 Da PI: 9.1917 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 46.8 | 5.4e-15 | 10 | 96 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffk+l + +++ +l +p f ++ g+++++ +l+++ g +W+v++ +k ++++++kGWkeFv+++gLk +f++F++ g+s+f v Pd.00g862790.m01 10 FFKAL--VHDFSN-QLKIPPAFYVHFaGEVPRR---SVLRTPAG-TWNVNV--EKVNDGFFFQKGWKEFVHDHGLKLCEFLIFRYAGNSKF--DV 93 67777..556665.5********8887666665...46677665.9*****..99999*****************************9999..55 PP EEE CS B3 95 kvf 97 v+ Pd.00g862790.m01 94 DVY 96 444 PP | |||||||
2 | B3 | 61.7 | 1.2e-19 | 222 | 309 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++ +++ ++g lv+pk+f +++ gkk k ++l+d s r+W vk+i +++s+r l++GW +Fv++ Lk+gD++vF+l++r+++ ++v++ Pd.00g862790.m01 222 IMHKAY-VNKGKLVVPKSFQNSCIGKK---KYVRLQD-SKRRWLVKCISNRNSSR--LSAGWYQFVRDRALKVGDVCVFELIDRNDAVMKVSI 307 444445.55566********9995553...4699999.899******88888877..9**************************9*99****9 PP E- CS B3 97 fr 98 fr Pd.00g862790.m01 308 FR 309 98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MARRRRKPSF FKALVHDFSN QLKIPPAFYV HFAGEVPRRS VLRTPAGTWN VNVEKVNDGF 60 FFQKGWKEFV HDHGLKLCEF LIFRYAGNSK FDVDVYGRNG CKKEFVMAVS KNDRSLEEGH 120 DNAIHGTQNV DGQGFGPADG TTTSQAICAI KNEVIDVESD TSMDIDEPDT QEDQLNEDSE 180 IGLPRELGST EHFYSRTQME NPSEALEAAK KFSSKHPLFR AIMHKAYVNK GKLVVPKSFQ 240 NSCIGKKKYV RLQDSKRRWL VKCISNRNSS RLSAGWYQFV RDRALKVGDV CVFELIDRND 300 AVMKVSIFRC NS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 4e-33 | B3 family protein |