PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g861240.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 335aa MW: 36675.1 Da PI: 10.5212 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 97 | 147 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g+ Pd.00g861240.m01 97 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 147 69*******.**********8...557*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MSDKNDTAVR NHTHVFHQNR WARWLEDPPL SLKMRKKPTL VGVPLGERGE QLLVQERERF 60 KGRIKAKGGQ APCNMAPREK TATAVRANGN GNVKEVHFRG VRKRPWGRYA AEIRDPGKKS 120 RVWLGTFDTA EEAARAYDAA AREFRGAKAK TNFPLPSENI SLNMTKNNNI NINKNSSGSN 180 NQSPSQSSTV ESSSREPPAL MVDSSPLDLN LAQGVSSGGF GSGPIRFPFQ HHQVPSVGAV 240 IGVPASAAAA ANHVLYFDSV FRAGMVKSHQ FHQRLRFDHH NLQQHDFHAY GGGGVFACGA 300 QSDSSDSSSV VDLNNHDLPR RGLLDLNLPP PPELA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 1e-26 | ERF family protein |