PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g861150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 1737aa MW: 195155 Da PI: 5.0163

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g861150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.9	1.7e-18	33	88	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps++ r+eL++klgLt+rq ++WF+ rR k+kk Pd.00g861150.m01 33 PKRQMKTPFQLETLEKAYALETYPSEAIRAELSEKLGLTDRQLQMWFCHRRLKDKK 88 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1737 aa Download sequence
MEGASEGENP TKNHENNNSN GKFNNSSEGQ SKPKRQMKTP FQLETLEKAY ALETYPSEAI 60 RAELSEKLGL TDRQLQMWFC HRRLKDKKEG GPAKKQRKSV PTLPEPPIDD LAHGSEPGSD 120 YGSGSGSGSS PFGRAELRNV VSRSGADDVP MRRRYYESPQ SILELRAIAC VEAQLGEPLR 180 EDGPVLGVEF DRLPPDAFGA PIVAEQQKRA AHALEGKYER HDAKPNKATP RALHEYPFLQ 240 DHSSIRSDAY GQAAQSHFQD SPIDGPSARA SSFAERQAVA FPSPGDDGCV PQRDSFTNVR 300 VNTQFSDPPT VAPENSNALS DGQINDSMLR MERKRKSEEA RIAKEVEAHE IRIRKELEKQ 360 DILRRKNEER MRKEMERHDR ERRKEEERLM RERQREEERS KREQKREIER REKFLQKEYI 420 RAEKRRQKEE LRKEREAVRR KAALEKATAR RLAKESMELI EDEQLELMEL AAASKGLSSI 480 ICIDLDTLQN LDAFRDSLAA FPPKSVQLKR PFAVQPWINS EENIGNFLMV WRFLITFADV 540 LELWPFTLDE FVQAFHDYDS RLLGEIHVAL LRLIIKDIED VARTPSTGLG VNQNGAANPG 600 GGHPQIVEGA YAWGFDIRNW QQHLNLLTWP EIFRQLALSA GFGPQLKKRS TAWSYSPDND 660 EGKGCQDAIS NLRNGSAAEN AFAIMQEKGL LAPRKSRHRL TPGTVKFAAF HVLSLEGNKG 720 LTVLELADKI QKSGLRDLTT SKTPEASISV ALTRDTKLFE RIAPSTYRVR AAYRKDPADA 780 EAILSAARKK IQIFENGFLA AEDADDVERD DADEVENDEV ERDEDFECDE VDDDPEVDDL 840 ATPSVAKKSP DDYNEVITFS ENGKDLCNDV ALNVQNEFEK DVSSSPVSGS KDANCPSASS 900 KQCVSGADIS ASNLDQENME IDESKSGESW VQGLTEGEYS DLSVEERLNG LVTLIGVANE 960 GNSIRVVLED RLEAANALKK QMWAEAQLDK SRLKEENVGK LDFPSFVGGK SETQVTGVED 1020 EQSPVRDVDN RNNEASPGTA ENQKSIHGSQ GVQNQLNGLP VERTLGAQDI SMGPDNFLSQ 1080 QLAYASKRSR SQLKSYIAHR AEEMYAYRSL PLGQDRRHNR YWQFVASASS NDPGSGRIFI 1140 ELNNGSWRLI DTEEAFDALL TSLDTRGIRE SHLRLMLQKI EASFKENVRK TVHCPNSAGP 1200 SRNRVKNEAD MDSSPDCPSG FDSPGSTVCT LNSDTAETSS SFRIELDRNE AEKRAALRRY 1260 QDFQKWMWKE CFSSSTFCAM KYAKKRCRSL FDVCDFCLSC YYFEDSHCAF CHQTFSAFYA 1320 NLNFSEHVIQ CKEKRKLEPW DSHIPCTSLP LARRLLKALI AHVEVSIPPE ALQSFWTEDR 1380 RKTWGGKLNA SSSTEELLQI LTLLETAVKR DFLSSNFAAT EELLGTGKQS EVFVPDFLDS 1440 GSVPLLPWIP HTTAAVALRL HEMDSSITHI QLEKAEPNRD KEVKEYLKLP MRLAPLKESE 1500 KTEVGHNEYI REENNTHLKS ARNSFRRGRG GREQGRGKKW QRKVNNSKSG ASRQKGSGNL 1560 SQGFRPVGKR TQGQGSARGR RTVRKRRTKD RAVEGTPLGR MTDVRSSPES GGESPRNLGE 1620 EWDDEKIDMI HMKGDEQGEG YEQAEALESE DDDQAVGYEQ GNWETGFDGT SSGWHEGLLE 1680 ASDEDMDASE DDNNGIEEVR DEDSEGDVDM SDASDEIQNK ITNDDGSDSA VSDDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1737 aa Download sequence

MEGASEGENP TKNHENNNSN GKFNNSSEGQ SKPKRQMKTP FQLETLEKAY ALETYPSEAI  60
RAELSEKLGL TDRQLQMWFC HRRLKDKKEG GPAKKQRKSV PTLPEPPIDD LAHGSEPGSD  120
YGSGSGSGSS PFGRAELRNV VSRSGADDVP MRRRYYESPQ SILELRAIAC VEAQLGEPLR  180
EDGPVLGVEF DRLPPDAFGA PIVAEQQKRA AHALEGKYER HDAKPNKATP RALHEYPFLQ  240
DHSSIRSDAY GQAAQSHFQD SPIDGPSARA SSFAERQAVA FPSPGDDGCV PQRDSFTNVR  300
VNTQFSDPPT VAPENSNALS DGQINDSMLR MERKRKSEEA RIAKEVEAHE IRIRKELEKQ  360
DILRRKNEER MRKEMERHDR ERRKEEERLM RERQREEERS KREQKREIER REKFLQKEYI  420
RAEKRRQKEE LRKEREAVRR KAALEKATAR RLAKESMELI EDEQLELMEL AAASKGLSSI  480
ICIDLDTLQN LDAFRDSLAA FPPKSVQLKR PFAVQPWINS EENIGNFLMV WRFLITFADV  540
LELWPFTLDE FVQAFHDYDS RLLGEIHVAL LRLIIKDIED VARTPSTGLG VNQNGAANPG  600
GGHPQIVEGA YAWGFDIRNW QQHLNLLTWP EIFRQLALSA GFGPQLKKRS TAWSYSPDND  660
EGKGCQDAIS NLRNGSAAEN AFAIMQEKGL LAPRKSRHRL TPGTVKFAAF HVLSLEGNKG  720
LTVLELADKI QKSGLRDLTT SKTPEASISV ALTRDTKLFE RIAPSTYRVR AAYRKDPADA  780
EAILSAARKK IQIFENGFLA AEDADDVERD DADEVENDEV ERDEDFECDE VDDDPEVDDL  840
ATPSVAKKSP DDYNEVITFS ENGKDLCNDV ALNVQNEFEK DVSSSPVSGS KDANCPSASS  900
KQCVSGADIS ASNLDQENME IDESKSGESW VQGLTEGEYS DLSVEERLNG LVTLIGVANE  960
GNSIRVVLED RLEAANALKK QMWAEAQLDK SRLKEENVGK LDFPSFVGGK SETQVTGVED  1020
EQSPVRDVDN RNNEASPGTA ENQKSIHGSQ GVQNQLNGLP VERTLGAQDI SMGPDNFLSQ  1080
QLAYASKRSR SQLKSYIAHR AEEMYAYRSL PLGQDRRHNR YWQFVASASS NDPGSGRIFI  1140
ELNNGSWRLI DTEEAFDALL TSLDTRGIRE SHLRLMLQKI EASFKENVRK TVHCPNSAGP  1200
SRNRVKNEAD MDSSPDCPSG FDSPGSTVCT LNSDTAETSS SFRIELDRNE AEKRAALRRY  1260
QDFQKWMWKE CFSSSTFCAM KYAKKRCRSL FDVCDFCLSC YYFEDSHCAF CHQTFSAFYA  1320
NLNFSEHVIQ CKEKRKLEPW DSHIPCTSLP LARRLLKALI AHVEVSIPPE ALQSFWTEDR  1380
RKTWGGKLNA SSSTEELLQI LTLLETAVKR DFLSSNFAAT EELLGTGKQS EVFVPDFLDS  1440
GSVPLLPWIP HTTAAVALRL HEMDSSITHI QLEKAEPNRD KEVKEYLKLP MRLAPLKESE  1500
KTEVGHNEYI REENNTHLKS ARNSFRRGRG GREQGRGKKW QRKVNNSKSG ASRQKGSGNL  1560
SQGFRPVGKR TQGQGSARGR RTVRKRRTKD RAVEGTPLGR MTDVRSSPES GGESPRNLGE  1620
EWDDEKIDMI HMKGDEQGEG YEQAEALESE DDDQAVGYEQ GNWETGFDGT SSGWHEGLLE  1680
ASDEDMDASE DDNNGIEEVR DEDSEGDVDM SDASDEIQNK ITNDDGSDSA VSDDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	89	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein