PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g860860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 187aa    MW: 20387.6 Da    PI: 9.885
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g860860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.7e-1960110255
               AP2   2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrd      ++ +r++lg+f taeeAa a+++a+ +++g
  Pd.00g860860.m01  60 HYRGVRRRP-WGKYAAEIRD----SaRHgARVWLGTFSTAEEAALAYDRAAFRMRG 110
                       8********.**********....33236*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MVSASTQNEL PLNENDSQDM VIYQVLNEAM VINPSFLPQR HQMNHQPNGL EPSKNIGKKH  60
YRGVRRRPWG KYAAEIRDSA RHGARVWLGT FSTAEEAALA YDRAAFRMRG TKALLNFPPD  120
VVAASSSPSS SIHRVRPSFS VPCSSNSNST TSDSSGSSSL LSIGTPRSES QSNTSNVEAQ  180
NTQGPII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.13e-32ERF family protein