PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g860490.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 282aa    MW: 30253.3 Da    PI: 7.9169
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g860490.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.66.9e-1193139354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h+e+ErrRR+riN  +++Lr l+P       +K++Ka+ L  ++  +k+L
  Pd.00g860490.m01  93 KNHSEAERRRRERINAHLSTLRGLVPCT-----EKMDKAALLATVISQVKEL 139
                       58*************************8.....7********9999888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MEASLSQSSL FGLPQLLALL VCSSPALVHR SEYSSLFDPF THGSSGFGGA LRGGGSVLPH  60
SLVLDSEKGE LVKAPARVGK KGVSEAKALA ALKNHSEAER RRRERINAHL STLRGLVPCT  120
EKMDKAALLA TVISQVKELK KDALESSKGF LIPVDADEVQ VEPYDTGAGD GTISVRASVC  180
CEYRSELLSD LREALDSLHL QMVKADIATL GNRVKNVFVF TSCKERSNDA DADAFQLLAS  240
SVHQALSSVL DKASASPEYS PRTTLLSKRR RVSYFDTSSS SA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199104ERRRRE
2268272KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.11e-34bHLH family protein