PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g857920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 348aa MW: 39710.5 Da PI: 7.5952

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g857920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.1	4.2e-15	49	140	3	99
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE.. CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgrsefel 92 k l ++++++++p kf++++ +++ e l+l+d+s sW+v++ ++k+ g++++++GW+eF k+n L +++++ + ++g++ f Pd.00g857920.m01 49 KLL---AGFNTDCMRIPQKFLKHMlkDLS--ERAILKLKDSSDSSWTVTV-HNKREGAVYFKNGWEEFIKDNSLGtDNEMLQLFYEGKMHF-- 133 555...5677788******77775444..5569***********.6777788**************97788888888887888.. PP EEEEE-S CS B3 93 vvkvfrk 99 v++f k Pd.00g857920.m01 134 SVRIFGK 140 8888765 PP
2	B3	56.8	4e-18	268	347	16	99
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +p f +eh ++ ++++ +l++ +g +W+v++ + ++++++ +++GW +Fv+an++++gD+++F+l + + +++v+++rk Pd.00g857920.m01 268 QFIPTAFSREHF-PQGKGFKAILKNAEGGKWTVNC-IPNSPQSHNFSAGWYKFVSANQIRVGDTCIFELLS--RYQMMVHILRK 347 579******4.346799************.6999999***********************876..55569999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MASQSTQSAA AVTSQQNPKK HRASLSAQTE EKMVRKISKN EEEKHSFFKL LAGFNTDCMR 60 IPQKFLKHML KDLSERAILK LKDSSDSSWT VTVHNKREGA VYFKNGWEEF IKDNSLGTDN 120 EMLQLFYEGK MHFSVRIFGK NGIERSEELS SSEEEEEDSE DNTSEDLEAD FTKIGSLHNS 180 LAKNTTKRPR GRPRKYPVSS SKPRPLKSCK VESGEELSSS KSSELNEIKE EEEDSEDSTS 240 EDLEGVEPEA FKSNFPYFKG IIRQTKCQFI PTAFSREHFP QGKGFKAILK NAEGGKWTVN 300 CIPNSPQSHN FSAGWYKFVS ANQIRVGDTC IFELLSRYQM MVHILRKR

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MASQSTQSAA AVTSQQNPKK HRASLSAQTE EKMVRKISKN EEEKHSFFKL LAGFNTDCMR  60
IPQKFLKHML KDLSERAILK LKDSSDSSWT VTVHNKREGA VYFKNGWEEF IKDNSLGTDN  120
EMLQLFYEGK MHFSVRIFGK NGIERSEELS SSEEEEEDSE DNTSEDLEAD FTKIGSLHNS  180
LAKNTTKRPR GRPRKYPVSS SKPRPLKSCK VESGEELSSS KSSELNEIKE EEEDSEDSTS  240
EDLEGVEPEA FKSNFPYFKG IIRQTKCQFI PTAFSREHFP QGKGFKAILK NAEGGKWTVN  300
CIPNSPQSHN FSAGWYKFVS ANQIRVGDTC IFELLSRYQM MVHILRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	195	KRPRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16210.2	6e-11	B3 family protein