PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g855780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 356aa    MW: 40067 Da    PI: 6.2012
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g855780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.91.1e-124489145
          trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer 45
                      rW++qe+l+L+e+r++++ +++++++k+plW+evs+ m +e+g++ 
  Pd.00g855780.m01 44 RWPRQETLTLLEIRSRLDFKFKEANQKGPLWDEVSRIMcEEHGLSL 89
                      8***********************************9978899875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MHIFGFKCAG GGAAANSATV TASLSGGGGL MEAEAGGDIG GSGRWPRQET LTLLEIRSRL  60
DFKFKEANQK GPLWDEVSRI MCEEHGLSLS NSSEFDTSSS EDQENNDVSA AAMDDDSPDI  120
KTMRKRRGGR GWKVKIKEFI DAQMRKLMEK QEEWLERLMR TLEQKERERM VREEEWRKQE  180
VERVEKEHKF WAKERAWIEA RDKALMEALH KLTGGSSSTD QAKANYSSPS PDHDQHHHHH  240
HHHQTSSDHD QIVHNTSSAR ELLNKKRKEN VNSKSSACYF QNNESCSSLY SSQGGYCAEM  300
NDHEQGGNND GSNNSPCGNA NVGNAVQDNC FPFLMSEGEN LWENYGLKLS KGSQNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10000.13e-23Trihelix family protein