PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g855730.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 200aa MW: 22343.1 Da PI: 4.8579 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.9 | 6e-14 | 43 | 93 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 ykGVr+ + g+Wv+e+r p k+ r++lg+f ++ Aa+a++ a+++l+ge Pd.00g855730.m01 43 IYKGVRQ--RCGKWVCELRQP---DqKKSRIWLGTFTCPDRAARAYDVAALALKGE 93 69***86..47******9998...3357*************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MTDFTDDASS SSNRVSAQAH LQSVEFKKRK AGRKKFNETR HPIYKGVRQR CGKWVCELRQ 60 PDQKKSRIWL GTFTCPDRAA RAYDVAALAL KGESAALNFP HEASTLPRIA STCSVKDLQC 120 AAAEAADGFF EVEVKASGLE EKVEEQVLYL DEEELFNMPG LIDSLAEGLI LTPPAMQKGF 180 NWNDFDDGME NVVDFSLWSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 1e-41 | ERF family protein |