PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g853770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 338aa    MW: 37832 Da    PI: 5.1348
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g853770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.11.7e-2138132185
          trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                       rWt++e+ +Lie+++ +e+++++g+            +p+W+ vs+++++rg++r+p+qC+++w+nl  ++kki+++e++ +  ++s +++ +
  Pd.00g853770.m01  38 RWTRHETFVLIEGKKVVENAVQKGRsrsssalgsdHFEPKWDLVSSYCKQRGVSREPVQCRKRWSNLLVDFKKIRNWESQIKGAAESFWVMRN 130
                       8*********************986666777777688*******************************************9888888888877 PP

          trihelix  84 ql 85 
                       ++
  Pd.00g853770.m01 131 DV 132
                       65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MALDSNKHEG ASSTTPDQVD RQQVLNGSSA DRAKRHPRWT RHETFVLIEG KKVVENAVQK  60
GRSRSSSALG SDHFEPKWDL VSSYCKQRGV SREPVQCRKR WSNLLVDFKK IRNWESQIKG  120
AAESFWVMRN DVRKERKLPG FFDREVYNIL DGNAVTATAA CPLALFIPVQ TDVQSGDGAE  180
EAAAEEEEEE EPGKAANGLQ QDMAEDGLCS DSEESEQEET ESKKENLMQD SPATTVTTPM  240
PSSGTIKEKR GLDSNTCGEH ISQEKRKQRR LAIDGCEDNY SDQLISVLER NNALLNAQLE  300
ARNINCHLDR EQRKEQSNSL LAAISKVTDA LVRIADKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1264271EKRKQRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.13e-76Trihelix family protein