PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g852710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 382aa MW: 42496.9 Da PI: 5.6923

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g852710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.3e-12	234	281	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g852710.m01 234 STHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 281 68***********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MTNNYQPKFG FSNVERNKVN NGEVEVLFDE EDMVDLDMSL VDRGVGDVTD SEWFYFYTVS 60 LTQSFAAGHG NNSILGRAFC SGGFVWLAGD HELQFYECER VKEARMHGIQ TLVCVATPCG 120 VLELASLDVI KEDWGLVHLS KSLFESDNNR VSKQGSHDGN VLVSLLENEM FSGGQKDLTR 180 QECGVKEATP VNIGGSSSDS PSDSVGNFTS ANAKNIRLKK RGRSSNYGTG RESSTHVEAE 240 RQRREKLNHR FYVLRSVVPN VSKMDRSSLL ADAVAYINQL KEKVEELEAK IQAQPQNPKV 300 GAALEVDVKI LGSEAMIRVQ CPDQDYPYAK LMNALKALGF QVYHASISSV KELLIQDVVA 360 RVPYGFNSEE AVKMGIIKRW YN

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MTNNYQPKFG FSNVERNKVN NGEVEVLFDE EDMVDLDMSL VDRGVGDVTD SEWFYFYTVS  60
LTQSFAAGHG NNSILGRAFC SGGFVWLAGD HELQFYECER VKEARMHGIQ TLVCVATPCG  120
VLELASLDVI KEDWGLVHLS KSLFESDNNR VSKQGSHDGN VLVSLLENEM FSGGQKDLTR  180
QECGVKEATP VNIGGSSSDS PSDSVGNFTS ANAKNIRLKK RGRSSNYGTG RESSTHVEAE  240
RQRREKLNHR FYVLRSVVPN VSKMDRSSLL ADAVAYINQL KEKVEELEAK IQAQPQNPKV  300
GAALEVDVKI LGSEAMIRVQ CPDQDYPYAK LMNALKALGF QVYHASISSV KELLIQDVVA  360
RVPYGFNSEE AVKMGIIKRW YN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	224	LKKRGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	3e-50	bHLH family protein