PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g852570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 263aa    MW: 29281.9 Da    PI: 5.093
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g852570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP26.61e-0898132138
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 
                       r ++sL+llt+kf++l++++e+gi++ln++a++L   +
  Pd.00g852570.m01  98 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 132
                       6789*****************************9...3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MISLSRKDHL DQAGEQRKLV LKRKSDAADY EAESSDRTAA PGYTEAVTSP LQTPVSSKVG  60
KANKTSRLTK CSRSGPQTPA SNVGSPSGPN LTPAGPCRFD SSLGLLTKKF INLIKHAEDG  120
ILDLNNAADT LEVTTFLSVV MFEKQDGVVL MATTGNLKQI DEALQRPGRM DRDEDNKEKE  180
AARFAQLWNK IISSFREEDL ISDSEEELKG SNGLDEDLRL WASYRGQTLT RTVRGMMYYR  240
KALELQAFLD MAQDDDLLLF RWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.32e-30E2F/DP family protein