PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g852560.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 274aa    MW: 30300.4 Da    PI: 6.8656
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g852560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.41.5e-14114160354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  Pd.00g852560.m01 114 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 160
                       79*************************9.....8****************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MEIANSMEER GDLTEPWTLP PIHSFNPSAH DQFLLPTPPP IPSSSSYASF FNRRAPLQFT  60
YDGSASEHHH HLRILSETLG PMVQPGSAPF GLQAELGKLT AQEIMDAKAL AASKSHSEAE  120
RRRRERINNH LAKLRSLLPS TTKTDKASLL AEVIQHVKEL KRQTSLIAET SPVPTEMDEL  180
IVDDASDEDG KFVIKASLCC EDRSDLLPDL IKTLKALRLR TLKAEITTLG GRVKNVLSIE  240
EALKAVMEKT GGEHEQSSSG SVKRQRTNNI NILN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120125ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-88bHLH family protein