PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g852560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 274aa MW: 30300.4 Da PI: 6.8656 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.4 | 1.5e-14 | 114 | 160 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L Pd.00g852560.m01 114 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 160 79*************************9.....8****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MEIANSMEER GDLTEPWTLP PIHSFNPSAH DQFLLPTPPP IPSSSSYASF FNRRAPLQFT 60 YDGSASEHHH HLRILSETLG PMVQPGSAPF GLQAELGKLT AQEIMDAKAL AASKSHSEAE 120 RRRRERINNH LAKLRSLLPS TTKTDKASLL AEVIQHVKEL KRQTSLIAET SPVPTEMDEL 180 IVDDASDEDG KFVIKASLCC EDRSDLLPDL IKTLKALRLR TLKAEITTLG GRVKNVLSIE 240 EALKAVMEKT GGEHEQSSSG SVKRQRTNNI NILN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 125 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 4e-88 | bHLH family protein |