PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g852410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 196aa    MW: 21698.5 Da    PI: 6.3509
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g852410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.0001990105116
                       EEETTTTEEESSHHHH CS
           zf-C2H2   1 ykCpdCgksFsrksnL 16 
                       ++Cp C+k+F+r  n+
  Pd.00g852410.m01  90 FSCPVCSKTFNRYNNM 105
                       89********998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MQTPSTTTTT TDVGTSATSF LEADEDQDEE SIFLSLGPPG QVALHIGPPS SGSTINSSIG  60
NPNHNHIGAP IEGQYWIPSP AQILVGPTQF SCPVCSKTFN RYNNMQEGAR ILKRDKASFI  120
SAETSMLLLR RGVQEQHRAP KVKATQRLQD TADTLQKKTW VKAIWVPQMW ETICGERGLE  180
DSREELRQAL VLHLWV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.17e-18C2H2 family protein