PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g852400.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 350aa MW: 38646.1 Da PI: 8.6207

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g852400.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.8	4.5e-27	202	251	1	50
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHL 50 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHL Pd.00g852400.m01 202 KQRRNWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHL 251 79***********************************************9 PP
2	Myb_DNA-binding	37.6	5e-12	204	252	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r +W++e++ ++++a +qlGg t+k I + m g+t ++ks+++ Pd.00g852400.m01 204 RRNWSPELHRRFLHALQQLGGShaaTPKQIRELMKvDGLTNDEVKSHLR 252 679***************99***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MQASRLGFRD YVKALEEERH KIQVFQRELP LCLELVTQAI ERCKQQLSDT TTDYMHGQSE 60 CSEQTSSEGH VFEEFIPLKR TSSSDSDDDE VQESQEPKTN DKDKTNGDKK KSDWLRSAQL 120 WNTTPDPPLK EELPRKALVM EVKRNGGAFQ PFQREKSVGK TNRPVAKVPA SVPATSSTTD 180 TVSGGSGESL KKEEKDGQGQ RKQRRNWSPE LHRRFLHALQ QLGGSHAATP KQIRELMKVD 240 GLTNDEVKSH LRFLVVGGIW VPPQDYAAVA ATTASKDAAR VAAANGIYAP VATSPSTVTP 300 VSPPSLMQRP RPKRPESSHS DERVSHSEGR GHCNSTATSS STHTTASPVL

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MQASRLGFRD YVKALEEERH KIQVFQRELP LCLELVTQAI ERCKQQLSDT TTDYMHGQSE  60
CSEQTSSEGH VFEEFIPLKR TSSSDSDDDE VQESQEPKTN DKDKTNGDKK KSDWLRSAQL  120
WNTTPDPPLK EELPRKALVM EVKRNGGAFQ PFQREKSVGK TNRPVAKVPA SVPATSSTTD  180
TVSGGSGESL KKEEKDGQGQ RKQRRNWSPE LHRRFLHALQ QLGGSHAATP KQIRELMKVD  240
GLTNDEVKSH LRFLVVGGIW VPPQDYAAVA ATTASKDAAR VAAANGIYAP VATSPSTVTP  300
VSPPSLMQRP RPKRPESSHS DERVSHSEGR GHCNSTATSS STHTTASPVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	7e-82	G2-like family protein