PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g849620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 310aa    MW: 34350.1 Da    PI: 6.0338
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g849620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof107.85.4e-3461122263
            zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                       ++k l+cprC+s +tkfCy+nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+sss
  Pd.00g849620.m01  61 PDKVLPCPRCNSLKTKFCYFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSSS 122
                       78999****************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MEDPSVKVSC KQDQFFELDK GSENNHHGQI LENEGEVDCN PEEDYIASDA DDGKERSFTK  60
PDKVLPCPRC NSLKTKFCYF NNYSVYQPRH FCKSCRRYWT AGGTIRNLPL GTRRHRNKHS  120
SSQYQVVGEP SAVPVTQGDT LNFVGQQHLL PVQLPASPKP VNGMREVLNS GIDTVLVESI  180
ATALNHKNQK RSSKDGSAAA GDNSEEPSSS SSSLTATTSQ QNACLGKEME QVDLPRYGND  240
YNLTYTEQYF PVPQWAENSS WGMMMFGPHS NNPSHMGSLP MVTVPGFCIP SFIFPIAPSS  300
YQGYMPSSDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.13e-35Dof family protein