PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g847210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 406aa MW: 45851.3 Da PI: 6.4164

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g847210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.1	5.9e-17	143	235	4	99
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 v +++ + k++ l +p fa++h ++++ + + l+ ++gr+W+vk++y+k+ r ++ GW +Fv++n+L++ D++vF+l+++ + ++ v + Pd.00g847210.m01 143 VVMQPWYVKQSFLPMPPGFAKRHLIEHPAG-NVFLRVSDGRTWSVKFKYEKSIAR--FQYGWLGFVRDNNLEVDDVCVFSLIEDVKLSFDVVF 232 44566666666799*******4444444.7***********77777655..99*********************99888888888 PP E-S CS B3 97 frk 99 fr+ Pd.00g847210.m01 233 FRT 235 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MEIELRRCNN GGVWFDKGWP EFSKFCSLDY EEEEEQDDAD DESVEILDVF PPCQRKAREK 60 SPLPCPQPHK KMRTRSSGMM LEESLRNKAS DRSKSEMKRD KSPLVPSEVK DSVGRMHMST 120 TSGKAVGLQR AIAYKSVNPS FRVVMQPWYV KQSFLPMPPG FAKRHLIEHP AGNVFLRVSD 180 GRTWSVKFKY EKSIARFQYG WLGFVRDNNL EVDDVCVFSL IEDVKLSFDV VFFRTTEEAA 240 NCPLSPGRHD FPTKKGGGGT SSNRTGKATA LDRANAFRSQ NPSSFIVSIR PSYINGRWRL 300 WLPSKFYKLS PSIKHSCEVI LQVSNGRTWS VGLSKGRPRF THGAKCTNDG EQIVPTKEET 360 DNEDVDSSDD SSNDSSDDSG DDLSDDSGDD SVEIMDKFPP PEKQGW

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MEIELRRCNN GGVWFDKGWP EFSKFCSLDY EEEEEQDDAD DESVEILDVF PPCQRKAREK  60
SPLPCPQPHK KMRTRSSGMM LEESLRNKAS DRSKSEMKRD KSPLVPSEVK DSVGRMHMST  120
TSGKAVGLQR AIAYKSVNPS FRVVMQPWYV KQSFLPMPPG FAKRHLIEHP AGNVFLRVSD  180
GRTWSVKFKY EKSIARFQYG WLGFVRDNNL EVDDVCVFSL IEDVKLSFDV VFFRTTEEAA  240
NCPLSPGRHD FPTKKGGGGT SSNRTGKATA LDRANAFRSQ NPSSFIVSIR PSYINGRWRL  300
WLPSKFYKLS PSIKHSCEVI LQVSNGRTWS VGLSKGRPRF THGAKCTNDG EQIVPTKEET  360
DNEDVDSSDD SSNDSSDDSG DDLSDDSGDD SVEIMDKFPP PEKQGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	4e-14	B3 family protein