PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g844520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 274aa MW: 31035.4 Da PI: 7.3244 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.9 | 4.9e-10 | 187 | 230 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ ++RR+ri +++ L+el+P+ + K++ +++LekA+ Y+k Lq Pd.00g844520.m01 187 IAAKNRRERISERLKILQELVPNgC------KVDLVTMLEKAISYVKFLQ 230 5679*******************77......******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MKERFIETEK KEWVSRATSN YHQPDHQVAH SVINFKSSGY NSFFQNSESL LSFEKNSKQN 60 ILKTRNDKDE HFNCDDDLHH GNYQWNHTAS VSDPRLSGDF NCFQTASNYS SMPNTSKDDH 120 GDEAYGWLYS EATVVADGFQ EPESQEGFHK RPHTGEAMQP LKKQCTNSGT KKPKPKSSSP 180 TKDPQSIAAK NRRERISERL KILQELVPNG CKVDLVTMLE KAISYVKFLQ LQVKVLATDE 240 FWPVQGGKAP DISQVKEAID AILSSQRDTS SSSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G37800.1 | 4e-60 | bHLH family protein |