PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g841260.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 411aa MW: 45252.9 Da PI: 6.1804 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.8 | 5.3e-10 | 220 | 267 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g841260.m01 220 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 267 8**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence |
MLNCTNAPGT FLAGNCTDMT VLERQRARMK WHQHEHNDPI QLHQQQQGYN FSGNELSGVF 60 SVPIPAGQAQ GFMGLVCGDS AVKPDPCLEN RWAELGYGSC GLVVNNNGAA EFEEMINGHN 120 NNSNISRTFS CPPTVAAEKK SNDAVLSQKI SSPPGKESFK KRKADKVQSN KAVAAEDDST 180 EKRMKGESSG DTSKDNSKVS DVQKPDYIHV RARRGQATDS HSLAERVRRE KISERMKYLQ 240 DLVPGCNKIT GKAGMLDEII NYVQSLQRQV EFLSMKLAAV NPRLDFNIDD LFAKEMFPAC 300 AANFQTIGMS SEMTNSAYVQ FNPVQQMVSS CGLDMGINSS DLALRRAISA PVSIPETFID 360 TSCFTQAPPT AIWDADLQNL FNVELQQGRT TPFQSQPFTG SIEASNLKME M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 2e-66 | bHLH family protein |