PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g840150.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 224aa MW: 26023.5 Da PI: 6.6363 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27 | 8.3e-09 | 32 | 80 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +E++RR++++ +++L +llP + ++++ l + +A++YIk+L+ Pd.00g840150.m01 32 RRVIEKNRRNQMKVLYSKLNSLLPRQ--NSQEPLCLPDQIDEAINYIKNLE 80 5689*********************6..26666***************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGSFVANLEE RDHQIPMDRN QGSQSSSTKV ERRVIEKNRR NQMKVLYSKL NSLLPRQNSQ 60 EPLCLPDQID EAINYIKNLE SKLQKSKEKR DSLKGNRKRS HTACTNLDSM RSSKPPQIEI 120 HEMGSTLEVV LISGLDNHQF MFTEIIRILH EEQADVVHVS LSTLGDSIFH VIRAEMGKYM 180 LDFGAAKITE KLRRFVNGST SDEELQREYL WDFEIYPETI WDQL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 99 | KRDSLKGNRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 7e-41 | bHLH family protein |