PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g839630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 327aa    MW: 36517.1 Da    PI: 8.1325
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g839630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.31.6e-28172231159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sae+p v++ tYegeHnh 
  Pd.00g839630.m01 172 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQKSAENPCVLVATYEGEHNHM 231
                       58***************************99****************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDSEWVNTSL GLNVIPFHPA SDDQAPVKKQ LELEGDYAKV FEGHASVKQE AAASHVLTEE  60
LNRISLENKK LTKMLTALCE NYTNLQSHVK ELMITKQQSS DQNDLATNFN KKRKPDGEDY  120
SNMIGLTSPG TNTETSSISD EEYPCKRPKE NMNLKISRVH VRTEASDTRL IVKDGYQWRK  180
YGQKVTRDNP SPRAYYKCSF APSCPVKKKV QKSAENPCVL VATYEGEHNH MHPETRAEVT  240
LIGSISPNQQ LSPLSPSMPK RTSPVPTFSC DKNNNLSPRE IEGAPPAFQQ FLVQQMASSL  300
TKDPNFASAL AAAISGRFSD HSRMGNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.28e-72WRKY family protein