PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g837690.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 1016aa MW: 113186 Da PI: 5.8825

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g837690.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.3	5.8e-32	114	170	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+edp++++itYeg H h Pd.00g837690.m01 114 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSSEDPDTLIITYEGLHLH 170 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1016 aa Download sequence
MEYAMGATWS DGSEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP 60 TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR 120 KYGQKSIKNS PNPRSYYRCT NPRCSAKKQV ERSSEDPDTL IITYEGLHLH FAYPFFPLNN 180 QALNTSPPMK KPRNKTSQPH AEDREHEAQE SPRSITPDPD PDLQPGAFPD PHEEFVEKEP 240 SAQGLLQDVV PFMIRNPNPS SASSNSSCSS YRSSPTSPSS LSWATSYFDN VISGTYNGRT 300 TFLHETVPLG NACISGVDGE LVSNTYLSNF KSFLTNPRIR RFFSSQGHEK KNYENYYPKN 360 KKEIPKGNGQ KSGSKEGSNA GDQGNTWELF IPWHQIIGPI MFLGFVFTSL LLNPQQAKEI 420 SFQEFKNKLL EPGLVDHIEV ANKSVAKVYV RSSPHDKKQS GDDAVKGPAD GSSSGGNATQ 480 YKYYFNIGSV ESFEEKLEEA QEALGFDRHD FVPVIYVSQI NWFQELMRYG PTALLLGALW 540 FMSRKMPSIG GPGGKGGRGI FNIGKAQITK LDKNAKNKVF FKDVAGCDEA KQEIMEFVHF 600 LKNPKKYEEV RSLFQEARQC APSIIFIDEI DAIGRARGRG GFSGGHDERE STLNQLLVEM 660 DGFGTTAGVV VLAGTNRPDI LDKALLRPGR FDRQITIDKP DIKGRNQIFQ IYLNKLKLDL 720 EPSYYSERLA ALTPGFAGAD IANVCNEAAL IAARNESPKI IMKHFEAAID RVIGGLEKKN 780 KVVSKLERRT VAYHESGHAV AGWFLEHAEP LLKVTIVPRG TAALGFAQYV PNENLLMTKE 840 QLFDMTCMTL GGRAAEQVLL GKISTGAQND LEKVTKMTYA QVAVYGFSDK VGLLSFPQRD 900 DAFEMAKPYS SKTGAIIDSE VREWVAKAYV RTIELIEEHK EQVGQIAELL LEKEVLHQDD 960 LVQVLGERPF KSNEPTNYDR FKEGFQEEDK EPKETAEGGN VDDGRSPPIQ PDVVPA

Sequence ? help Back to Top

Protein Sequence Length: 1016 aa Download sequence

MEYAMGATWS DGSEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP  60
TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR  120
KYGQKSIKNS PNPRSYYRCT NPRCSAKKQV ERSSEDPDTL IITYEGLHLH FAYPFFPLNN  180
QALNTSPPMK KPRNKTSQPH AEDREHEAQE SPRSITPDPD PDLQPGAFPD PHEEFVEKEP  240
SAQGLLQDVV PFMIRNPNPS SASSNSSCSS YRSSPTSPSS LSWATSYFDN VISGTYNGRT  300
TFLHETVPLG NACISGVDGE LVSNTYLSNF KSFLTNPRIR RFFSSQGHEK KNYENYYPKN  360
KKEIPKGNGQ KSGSKEGSNA GDQGNTWELF IPWHQIIGPI MFLGFVFTSL LLNPQQAKEI  420
SFQEFKNKLL EPGLVDHIEV ANKSVAKVYV RSSPHDKKQS GDDAVKGPAD GSSSGGNATQ  480
YKYYFNIGSV ESFEEKLEEA QEALGFDRHD FVPVIYVSQI NWFQELMRYG PTALLLGALW  540
FMSRKMPSIG GPGGKGGRGI FNIGKAQITK LDKNAKNKVF FKDVAGCDEA KQEIMEFVHF  600
LKNPKKYEEV RSLFQEARQC APSIIFIDEI DAIGRARGRG GFSGGHDERE STLNQLLVEM  660
DGFGTTAGVV VLAGTNRPDI LDKALLRPGR FDRQITIDKP DIKGRNQIFQ IYLNKLKLDL  720
EPSYYSERLA ALTPGFAGAD IANVCNEAAL IAARNESPKI IMKHFEAAID RVIGGLEKKN  780
KVVSKLERRT VAYHESGHAV AGWFLEHAEP LLKVTIVPRG TAALGFAQYV PNENLLMTKE  840
QLFDMTCMTL GGRAAEQVLL GKISTGAQND LEKVTKMTYA QVAVYGFSDK VGLLSFPQRD  900
DAFEMAKPYS SKTGAIIDSE VREWVAKAYV RTIELIEEHK EQVGQIAELL LEKEVLHQDD  960
LVQVLGERPF KSNEPTNYDR FKEGFQEEDK EPKETAEGGN VDDGRSPPIQ PDVVPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	1e-51	WRKY family protein