PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g837580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 259aa MW: 28297.3 Da PI: 10.4788 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 48.2 | 2.8e-15 | 4 | 34 | 48 | 78 |
SEEETTT--SS--S-STTTT-------S--- CS SBP 48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78 rfh+l efD++krsCrrrLa+hnerrrk+q+ Pd.00g837580.m01 4 RFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 34 9***************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 259 aa Download sequence |
MRKRFHQLPE FDQGKRSCRR RLAGHNERRR KPQPGSVLSA RFGRLSSSIY ENSSRVGSFL 60 MDFTAYPRHS GRDAWATTRT SERVPGNQNS NDTGKFLQHP WQSNSEITPS GLYLQGSAGG 120 TSYPGPGIPP GECVTGVTDS SCALSLLSSQ PWGSRNRVSG VGMNTVINTQ GPPVGQPITH 180 AGTSNHFPTT SWGFKGNAGS SSHEMLPDLG LGQMSQPPLS TQYSGVLELS QQSSRRQQQM 240 ELGHTRGYDT SSQHIHWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42200.1 | 8e-36 | SBP family protein |