PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g837380.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 534aa MW: 59161.9 Da PI: 4.4271 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 65.3 | 1.1e-20 | 52 | 102 | 3 | 54 |
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 r Wt L e+F++a+++ G e+AtPk+ile+m+ ++Lt+++v+SHLQkYR Pd.00g837380.m02 52 RWIWTISLREKFMQAIKHY-GLENATPKRILEFMDEPDLTIKNVASHLQKYR 102 789****************.9******************************* PP | |||||||
2 | Myb_DNA-binding | 26.7 | 1.3e-08 | 55 | 102 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT + e++ +a+k +G + t+k+I + m +t k++ s++qky+ Pd.00g837380.m02 55 WTISLREKFMQAIKHYGLEnaTPKRILEFMDePDLTIKNVASHLQKYR 102 999********************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 534 aa Download sequence |
MASKSVLIVA LLFSVLILCL QGTYAYQGGF GNGNRDSQGY GDDEERTAAP RRWIWTISLR 60 EKFMQAIKHY GLENATPKRI LEFMDEPDLT IKNVASHLQK YRKFLVKLKY AVVAGDEDMR 120 ERLSRSSFAR GHPELLFNNN ERDQPHSQLQ DQQLMEALFG STFQVQPSAG IGSTPPLTAA 180 ASNRHGSIQF SNDQQFSTSN ISRSIPPLIR SGQSSPLNNN PANFPLQQPT LGNRNGDQLF 240 FQENLPAAFG IQQPSNNFEN GGVSFDPMNN VGLTNNNIGT NNLMQVYPLQ SQPGTNNPFS 300 YNLATSVNQN GSNFTPMSSS FDNLGSHFND VNQFGVYWQS FGSAGFETGA SSAYQFPPNL 360 PNNKGDLDQQ QNVPVLPPPE GNFNDQCGLP NINVGGRNVE NSNRGFMNNT STVVSPPTLI 420 NNNNISHEQE SVSDSVISMM RHYLFTDEQD NYQPPSQQQD GGHDQLPYQV EVPDPAANQI 480 PNPSADQVPN PGPYHVEDNA PNEILEPGMP TLFESEDDNT WFSYLSEHIW DADT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G07210.1 | 7e-16 | ARR-B family protein |