PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g836120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 283aa    MW: 31411.6 Da    PI: 8.8776
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g836120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.66.7e-142569147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
  Pd.00g836120.m01 25 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 69
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGAASTPSDG SGKKVRKPYT ITKSRESWTD EEHDKFLEAL QLFDRDWKKI EDFVGSKTVI  60
QIRSHAQKYF LKVQKSGTTA HVPPPRPKRK AAHPYPQKAS KNVLVPLQAS IVYPSSMNAI  120
ASTYFPWDET SIMINPASNQ ILLSHEEFTS FQGTEADIRS KGLARINKCS LSGIESSSKT  180
LPSSEIPEQG KQAPLLHGIP DFSEVYSFIG SVFDPDSKGH AQKLREMDPI NFETVLLLMR  240
NLSINLSSPD FEPIREVLVS YDVNTKTVAA GIVTTKLNND LSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-116MYB_related family protein