PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g835400.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 501aa MW: 56428.3 Da PI: 7.9677

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g835400.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.7	4.6e-07	382	429	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E lvd++ ++G g+W+ I r + Rt+ +++++w+++l Pd.00g835400.m01 382 WTLSEVTTLVDGISEYGVGRWTDIKRVLFsssAYRTPIDLRDKWRNLL 429 **************************999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MDHEAHSRNK FVNMKSQRVK VEGSFAPALE DETETIEHLL AEPKSEYVTV DGVLCCGKEN 60 AGKCVDIEDF SSGYDFGLNT YSGGLHSAHP RGRYDELEFG VLDGLLDEVD EVEDIHAING 120 LASPCDDYLL DIGFTGKASE LGFGPCEKSH LGNSSSESQS PRLSGSSNGA VGISESSTVT 180 IQEFECKNNS IEKAVTHEFH GGFRRKKRCR TPVEGNVYPA SINLQNLELD NDENTLVKEI 240 VSGENEKLSV EATKLGAFRK EKRLRKPTLR YIEEFSGKKS KDSNERENCS ALTATQDHSK 300 VRCQNEHHHM SPGILSSVPE EDSISENQTL AEFRTQRKLA KKHASILALE SDEQPITSES 360 EDDHVPKKRS RKHDRRKHQR MWTLSEVTTL VDGISEYGVG RWTDIKRVLF SSSAYRTPID 420 LRDKWRNLLR ASCGKKMKKE VEQKEMRALP KSLVRRVREL ATVHPYPRQR GKKFAPPILP 480 TPSKSASSDL IRKYVRRKNR S

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MDHEAHSRNK FVNMKSQRVK VEGSFAPALE DETETIEHLL AEPKSEYVTV DGVLCCGKEN  60
AGKCVDIEDF SSGYDFGLNT YSGGLHSAHP RGRYDELEFG VLDGLLDEVD EVEDIHAING  120
LASPCDDYLL DIGFTGKASE LGFGPCEKSH LGNSSSESQS PRLSGSSNGA VGISESSTVT  180
IQEFECKNNS IEKAVTHEFH GGFRRKKRCR TPVEGNVYPA SINLQNLELD NDENTLVKEI  240
VSGENEKLSV EATKLGAFRK EKRLRKPTLR YIEEFSGKKS KDSNERENCS ALTATQDHSK  300
VRCQNEHHHM SPGILSSVPE EDSISENQTL AEFRTQRKLA KKHASILALE SDEQPITSES  360
EDDHVPKKRS RKHDRRKHQR MWTLSEVTTL VDGISEYGVG RWTDIKRVLF SSSAYRTPID  420
LRDKWRNLLR ASCGKKMKKE VEQKEMRALP KSLVRRVREL ATVHPYPRQR GKKFAPPILP  480
TPSKSASSDL IRKYVRRKNR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	2e-19	MYB_related family protein