PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g835030.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 327aa MW: 35714.4 Da PI: 10.0728 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.7 | 1.8e-31 | 256 | 313 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+ Pd.00g835030.m01 256 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLVVTYEGEHNHS 313 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MAVDFMGYRN SSFSAKLEEN AVQEAASGLE SVEKLIRLLS QAQQNQHQQD KYPSMVMDMD 60 CRAVADVAVS KFKKVISLLG RTRTGHARFR RAPLTLTSGS SSSSQNQAQT QETFVKQAPL 120 ESTKVYHATP IQQIPPPLHH HSTVLESTKD SSTTINFSYS ATTSFMSSLT GDSDSKQPLS 180 SSAFQITNMS QVSSAGKPPL SSASLKRKCS SDNLGSGKCG AGSSGRCHCS KKRKLRLKRV 240 VRVPAISLKM ADIPPDDYSW RKYGQKPIKG SPHPRGYYKC SSVRGCPARK HVERALDDPA 300 MLVVTYEGEH NHSLSVAETS NLILESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 1e-82 | WRKY family protein |