PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g834630.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 434aa MW: 48623.9 Da PI: 6.4389

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g834630.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.4	1e-07	383	416	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Pd.00g834630.m02 383 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 416 469*****************************87 PP
2	ELK	28.8	2.8e-10	337	358	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Pd.00g834630.m02 337 ELKHELKQGYKEKIVDIREEIL 358 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MAYHNHLSQQ DLPLHHFTDQ TQQQHQPFQS DQPDPNSKPT EPHHPFQAAP NWLNTALLRN 60 FTNADANNNH NNSPNNNGGG GASNFLNLHV TASDSTTSQA SNQWLSQPHR PILHRNHSDV 120 IDDVTAVAGD SMIAATISHD SADLKPDSSL NKTDIVVESG GGDGGMINWQ NARHKAEILS 180 HPLYEPLLSA HVACLRIATP VDQLPRIDAQ LAQSQNVVAK YSALGHGMVG DDKELDQFMR 240 HYVLLLCSFK EQLQQHVRVH AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSDDEDDQVD 300 SDANLFDGSM DGHDSMGFGP LIPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK 360 RRAGKLPGDT TSVLKAWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS 420 NPSTSTVLKS KRKR

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MAYHNHLSQQ DLPLHHFTDQ TQQQHQPFQS DQPDPNSKPT EPHHPFQAAP NWLNTALLRN  60
FTNADANNNH NNSPNNNGGG GASNFLNLHV TASDSTTSQA SNQWLSQPHR PILHRNHSDV  120
IDDVTAVAGD SMIAATISHD SADLKPDSSL NKTDIVVESG GGDGGMINWQ NARHKAEILS  180
HPLYEPLLSA HVACLRIATP VDQLPRIDAQ LAQSQNVVAK YSALGHGMVG DDKELDQFMR  240
HYVLLLCSFK EQLQQHVRVH AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSDDEDDQVD  300
SDANLFDGSM DGHDSMGFGP LIPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK  360
RRAGKLPGDT TSVLKAWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS  420
NPSTSTVLKS KRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	414	434	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein