PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g830460.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 218aa MW: 24689.4 Da PI: 8.9778 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.1 | 3.7e-33 | 139 | 197 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H+h+ Pd.00g830460.m01 139 LDDGYRWRKYGQKAVKNNKFPRSYYRCTFQGCNVKKQVQRLTKDEGIVVTTYEGMHTHP 197 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MFFPCSSSTS AANYDPMIPI SATNNLTTDD HHMGMGGSQV YNYFDGRDQS SNGLLGLRSS 60 AGNQVGREVL INKDHHQYLQ QQYSDLTTTA SANININNVV VGADQNPDEA TNSGNKNKGE 120 KKTRKPKYAF QTRSQVDILD DGYRWRKYGQ KAVKNNKFPR SYYRCTFQGC NVKKQVQRLT 180 KDEGIVVTTY EGMHTHPIEK PSDNFEHILN QMQIYTPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 3e-57 | WRKY family protein |