PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g830450.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 277aa    MW: 31024.2 Da    PI: 9.1948
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g830450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP127.26.4e-40379278
                      -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP  2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
                      C vegC++dls ++eyhrrh+vCe hsk+pvv+v+g+++rfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+++
  Pd.00g830450.m01  3 CLVEGCKTDLSLCREYHRRHRVCELHSKTPVVTVRGEQKRFCQQCSRFHSLVEFDEVKRSCRKRLNGHNQRRRKPKP 79
                      **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MSCLVEGCKT DLSLCREYHR RHRVCELHSK TPVVTVRGEQ KRFCQQCSRF HSLVEFDEVK  60
RSCRKRLNGH NQRRRKPKPE SLYFTSNFLS GYKGPRILQF SNPQLCATNN VRSMWPVEAK  120
KGAESMLYSR HPSFNGGDKP FLFLQTNNDP KAASGNRAAP QTFLRQQPFQ TTAASPAESR  180
KGGHIMSSDG MTRVIDSGCA LYLLSSHPAQ ASVTQSNVTT THPGQLLDSR LQMNGSFAEF  240
SCSHDAEDKA ANTEMMFLMG PDGFLDNGAQ MLPILLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.13e-47SBP family protein