PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g827610.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 132aa MW: 14766 Da PI: 9.6026 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.8 | 1.3e-13 | 70 | 113 | 8 | 55 |
AP2 8 wdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ +grW+A+I + g +k+ +l ++gt eeAa+a++ a+ +++g Pd.00g827610.m01 70 YHH-NGRWEARIGRvF---G-NKYLYLCTYGTQEEAARAYDIAAIEYRG 113 566.8******99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MASLILGAFQ SPFKRSPSAL ALPYPFLSPP PQLRFQSPQL PLHQSLQCTT VGAIRKPKEE 60 NVSITLMAMY HHNGRWEARI GRVFGNKYLY LCTYGTQEEA ARAYDIAAIE YRGISAVTNF 120 DLSSYISLPS PK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.2 | 8e-27 | ERF family protein |