PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g826930.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 502aa MW: 55018.1 Da PI: 7.3155 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.3 | 8.6e-30 | 212 | 271 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+ ed +++++tYeg+Hnh+ Pd.00g826930.m01 212 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCYEDMSILITTYEGTHNHP 271 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 502 aa Download sequence |
MPNSNSRTAP EKKADESVGY QEIYSQEESE LENARAEMGE VREENARLKL TLQHMEKDYQ 60 SLQCRFFDIL RQEASKKATN VDVGVHRIEE PNQLLSLCLG RSPREPKNDE TNTTNFTKLV 120 QVDHEDLNAN LTLGLGNSKL MDLPRELVRS QKPQETSLEE PKDHSEAGAG ESLPPSSKTP 180 KTTRNEDDEV PQQANAKRAR VSVRVRCDTP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTV 240 APACPVRKQV QRCYEDMSIL ITTYEGTHNH PLPFTASSMA STTAAAASML LSGSSTSQPG 300 FGSTATLLNG SDFGVFDSSR TNQLYLPKSS NPLLPTITLD LTASPSSSPI HLNRLSSSFA 360 SACTFPSSLS FCSSESNISP NSRGNGYLKY GSLPFDKGSF NLDQPYAEKN HQSSSQVSLT 420 ESLTKAITSD PNFKSVIAVA LSSMVGGGAA THRNQGEGER LGHHLKWSEA AHQFTSHNPL 480 IQNGKVCSTP SIFNRQSSDS QK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 4e-89 | WRKY family protein |