PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g826690.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 309aa MW: 34085.8 Da PI: 4.6366 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.8 | 7.6e-18 | 14 | 61 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 + pGfrFhPtdeelv +yL++k++++ l++ e ik+vdiyk++PwdLpk Pd.00g826690.m01 14 MLPGFRFHPTDEELVGFYLRRKIQQRLLPI-ELIKQVDIYKYDPWDLPK 61 579***************************.89**************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MDEKNDMDKI DDVMLPGFRF HPTDEELVGF YLRRKIQQRL LPIELIKQVD IYKYDPWDLP 60 KSAPPPKKLL DKSLPANDAW AICRIFKKTN SMAQRALSHS WGSPFPEPPA ASGLLNQGAH 120 CTQFSSENMS CTTDIGSSIQ FWSNNDLQQA SNASYSAFDT LPYKPINPTG SKPSIFDADQ 180 FPNGFMFSSG EMSGPISPAL IGDLSNTTGS IDFDGSQQQQ FSGFSINLSQ NQMQGNMETG 240 ENEGGFRKNL SSSTSHANNN NGQWGSIRPI AFPFSLASDD DAWKPTLPSD SPPCPSDMST 300 SYSTNKCYT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 1e-23 | NAC family protein |