PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g825780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 262aa    MW: 28495.3 Da    PI: 10.6338
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g825780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.95.5e-25212260249
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEE CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvve 49 
                       +D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp++++
  Pd.00g825780.m01 212 SDDFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAQDDPTMLI 260
                       69*************************988***************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAIDLVGFSK MDDRTAMEEA ASAGLQSMDH LIRVLSNQNP SQTQTQTPLD CREITDLTVS  60
KFKQLISVLN RTGHARFRRG PANQSSTPVQ PVQPKPQTTS SAFSVPKSNN DDSLTLSPPI  120
STTSSFLSSI TIGDGSVSNG KAISSILAPP APAFSAGKPP LSQSHRKRCH DNDVAAKTSS  180
SGRCHCSKRR KSKVKRTIRV PAISSKIADI PSDDFSWRKY GQKPIKGSPY PRGYYKCSSV  240
RGCPARKHVE RAQDDPTMLI WA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-81WRKY family protein