PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g823970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 482aa MW: 54510.7 Da PI: 6.3977

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g823970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.9	5.5e-14	26	70	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W++eEd++l + + +G+++W+ Ia+++ +t qc+ rw++yl Pd.00g823970.m01 26 TWSQEEDDILRNQISVHGTDNWAIIASKFK-DKTTRQCRRRWYTYL 70 6**************************9.***********97 PP
2	Myb_DNA-binding	43.6	6.7e-14	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + Pd.00g823970.m01 76 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 119 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MPQEEPRKKL GNEYSNSKKK ERHIVTWSQE EDDILRNQIS VHGTDNWAII ASKFKDKTTR 60 QCRRRWYTYL NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL 120 CKKRAKYEAL AKENATSYIN SNDKRVIIQN GFDTDGTTET TAPSKKMRRT HIPNLSENCN 180 SGDRLFEQCG KMNQQLRAPF TVLIQNFHNV DNLPDQHNVS STKEVPGNAQ NSKFQGSFLK 240 KDDPKITALM QQAELLSSLA LKVNTKNTDQ SLENAWKVLQ DFLNQSKESD ILSYGITDFD 300 FQLEDLKYLL EDLRSTNEGS RPSWQQPDLY DESPGSSEYS TGSTLLSQTE CYVEQNEAEI 360 GTLIEEIQPG SQSIPIRGEN DVREWEKGIV SSGTRKQEIF PSCNEGTKTD AVISVSSNTE 420 FSSPNQVTPL FRSLAAGIPS PKFSESERSF LLKTLGVESP SPYPSNNPSR PPPCKRALLQ 480 SL

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MPQEEPRKKL GNEYSNSKKK ERHIVTWSQE EDDILRNQIS VHGTDNWAII ASKFKDKTTR  60
QCRRRWYTYL NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL  120
CKKRAKYEAL AKENATSYIN SNDKRVIIQN GFDTDGTTET TAPSKKMRRT HIPNLSENCN  180
SGDRLFEQCG KMNQQLRAPF TVLIQNFHNV DNLPDQHNVS STKEVPGNAQ NSKFQGSFLK  240
KDDPKITALM QQAELLSSLA LKVNTKNTDQ SLENAWKVLQ DFLNQSKESD ILSYGITDFD  300
FQLEDLKYLL EDLRSTNEGS RPSWQQPDLY DESPGSSEYS TGSTLLSQTE CYVEQNEAEI  360
GTLIEEIQPG SQSIPIRGEN DVREWEKGIV SSGTRKQEIF PSCNEGTKTD AVISVSSNTE  420
FSSPNQVTPL FRSLAAGIPS PKFSESERSF LLKTLGVESP SPYPSNNPSR PPPCKRALLQ  480
SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-174	MYB family protein