PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g823810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 590aa MW: 64448.4 Da PI: 7.7692

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g823810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.5	3.7e-30	287	346	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ Pd.00g823810.m01 287 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 346 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MEMPKRRSKA MENNNTEENS FLGNTPVEDK TKKSDGHDEE GTSMEMEISK SSSSMDITIQ 60 RGHGWLAEPE QTNTSMPSSS AGKDRALIKH PQEDELQSAK AEMGEVKEEN DRLKLLLSRI 120 VRNYQSLQMH FHGLLQKDEE ARKSMDPSSS ARDQSNEQDE EADELVSLSL GRSSSTDQPR 180 KDEQMKKTSH FSKNGKGDDE EGLNGAGLAL ELGCRFEPAA DQSTEVVMKN SSSDNSCGDP 240 KEDDPTKLWP PSKTSKTTRS GDDEVSQQTH LKKARVSVRA RCDAPTMNDG CQWRKYGQKI 300 AKGNPCPRAY YRCTVSPSCP VRKQVQRCAD DMSILITTYE GSHNHPLPMS ATAMASTTSA 360 AASMLQSYSS TSQQGHTAMV PISASTNLQG LNFSTSTLSQ NSRLPQHFYF PNSSISTTNS 420 HPTVTLDLTA PSPSHFGRFP AAVFSSNPRY PSTCLNFSSS PSSSLDHNNH TLQLQAPWNN 480 NHTAAGYLNY GNRLMLTETI ASATKAITSN PKFQSALAAA LTSFVAQPPT HLPHTLRAIA 540 TQLCNQPKLL GRKRRRVDGV ARCRLGTINP RGAAAESRGP MSNDDSTGAG

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MEMPKRRSKA MENNNTEENS FLGNTPVEDK TKKSDGHDEE GTSMEMEISK SSSSMDITIQ  60
RGHGWLAEPE QTNTSMPSSS AGKDRALIKH PQEDELQSAK AEMGEVKEEN DRLKLLLSRI  120
VRNYQSLQMH FHGLLQKDEE ARKSMDPSSS ARDQSNEQDE EADELVSLSL GRSSSTDQPR  180
KDEQMKKTSH FSKNGKGDDE EGLNGAGLAL ELGCRFEPAA DQSTEVVMKN SSSDNSCGDP  240
KEDDPTKLWP PSKTSKTTRS GDDEVSQQTH LKKARVSVRA RCDAPTMNDG CQWRKYGQKI  300
AKGNPCPRAY YRCTVSPSCP VRKQVQRCAD DMSILITTYE GSHNHPLPMS ATAMASTTSA  360
AASMLQSYSS TSQQGHTAMV PISASTNLQG LNFSTSTLSQ NSRLPQHFYF PNSSISTTNS  420
HPTVTLDLTA PSPSHFGRFP AAVFSSNPRY PSTCLNFSSS PSSSLDHNNH TLQLQAPWNN  480
NHTAAGYLNY GNRLMLTETI ASATKAITSN PKFQSALAAA LTSFVAQPPT HLPHTLRAIA  540
TQLCNQPKLL GRKRRRVDGV ARCRLGTINP RGAAAESRGP MSNDDSTGAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	552	556	RKRRR
2	553	557	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	6e-71	WRKY family protein