PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g823300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 287aa    MW: 30898.3 Da    PI: 6.6832
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g823300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.19.8e-11171218455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Pd.00g823300.m01 171 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 218
                       8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDPPTLVNEC SFSNANATSF SLSEIWQFPM SGGGASGGDS GGGGALGLRR PNFAQSFAQF  60
GDVSGAIRDV LAGSDPNPMS LDVRGSHGGG AARKRLDAED DSPKSSGHIG GSDCDGKRLK  120
PAARSRDETR ESKAEAETSS GKPVEQSTQP PDPPKQDYIH VRARRGQATD SHSLAERARR  180
EKISERMKIL QDLVPGCNKV IGKALVLDEI INYIQSLQRQ VEFLSMKLET VNTRMNPGIE  240
VFPSKDFGQQ AFDTAAMAFG TQPPREYSRG SSPEWLHMQV GGGFERT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.16e-97bHLH family protein