PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g823300.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 287aa MW: 30898.3 Da PI: 6.6832 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.1 | 9.8e-11 | 171 | 218 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq Pd.00g823300.m01 171 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 218 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MDPPTLVNEC SFSNANATSF SLSEIWQFPM SGGGASGGDS GGGGALGLRR PNFAQSFAQF 60 GDVSGAIRDV LAGSDPNPMS LDVRGSHGGG AARKRLDAED DSPKSSGHIG GSDCDGKRLK 120 PAARSRDETR ESKAEAETSS GKPVEQSTQP PDPPKQDYIH VRARRGQATD SHSLAERARR 180 EKISERMKIL QDLVPGCNKV IGKALVLDEI INYIQSLQRQ VEFLSMKLET VNTRMNPGIE 240 VFPSKDFGQQ AFDTAAMAFG TQPPREYSRG SSPEWLHMQV GGGFERT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 6e-97 | bHLH family protein |