PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g822200.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 191aa MW: 21330.9 Da PI: 5.2865 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.3e-18 | 34 | 77 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w++ Pd.00g822200.m01 34 RGDFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNYWNT 77 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MEVAAGIAFL SSPVRPYQHL KTSLSDYLSP NVKRGDFSEE EEDLIIRLHN LLGNRWSLIA 60 GRVPGRTDNQ VKNYWNTRLC KKLGFKKQTP KALASSSETP KGPDSNSKQS CSCGTSSTVK 120 DMEALQNNQN PLLDDIVAAE DSNSNEEIQW MTEHCAESLS CSNGHNLISW GMLEFLQGHP 180 LELLYQNFEL S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 3e-34 | MYB family protein |